PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023929782.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NF-YB
Protein Properties Length: 167aa    MW: 17998 Da    PI: 5.7387
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023929782.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB185.34.8e-5827123197
           NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 
                     vreqdr+lPian+srimkk+lPan+ki+kdak+t+qecvsefisf+tseasdkcq+ekrktingddllwa+atlGfedy+eplkvyl++yreleg
  XP_023929782.1  27 VREQDRYLPIANISRIMKKALPANGKIAKDAKDTMQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYRELEG 121
                     69********************************************************************************************* PP

           NF-YB  96 ek 97 
                     ++
  XP_023929782.1 122 DS 123
                     97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MAEAPTSPAG GSHDSGGEQS PRSTGGVREQ DRYLPIANIS RIMKKALPAN GKIAKDAKDT  60
MQECVSEFIS FITSEASDKC QKEKRKTING DDLLWAMATL GFEDYIEPLK VYLARYRELE  120
GDSKGAARGG DSSAKRDAVG GLVAQNPQFA HHASLNYINS QFADAEG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37060.14e-81NF-YB family protein