PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023929879.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

TCP

Protein Properties

Length: 470aa MW: 52640.9 Da PI: 8.6389

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023929879.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	147.4	1e-45	113	255	2	134
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt......ssssasec..eaesssssasnsssg 88 +gkkdrhski+T++g+RdRR+Rls+++a++fFdLqd+LGfdk+sktieWL+ ++k+aikelt+ + +c +s++s+ s++ XP_023929879.1 113 TGKKDRHSKICTAQGPRDRRMRLSLQIARKFFDLQDMLGFDKASKTIEWLFSKSKTAIKELTERtmsqvkQ----FSCsdA---AKSTVSFTSES 200 79************************************************************6643330....333322...22222222222 PP TCP 89 ..........kaaksaakskksqksaasalnlakesrakarararertrekmrikn 134 + ++ ++ + k++ + + +a++sr kar+rarertrekm i++ XP_023929879.1 201 evvsenleivDDGEFV-NRLARVKKNRKIHRVARDSRDKARERARERTREKMIIRD 255 2345666555333333.44444445555699*******************9884 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MFPCSNSHSP FTYTNQTMLE KCFANDENTS SHLAPLFAED DDQFFSNLFL QQQFFVGTIS 60 SQAQTENSVV ASDNIKEASS NNTVSEQLIP SKRTIPKKKS NGGPKQTSPR KRTGKKDRHS 120 KICTAQGPRD RRMRLSLQIA RKFFDLQDML GFDKASKTIE WLFSKSKTAI KELTERTMSQ 180 VKQFSCSDAA KSTVSFTSES EVVSENLEIV DDGEFVNRLA RVKKNRKIHR VARDSRDKAR 240 ERARERTREK MIIRDLEKSK QSSEASPSNL GQVWSSTPLE TGEKACFCSQ EMKSSLRMMP 300 EVEEPSINNH LLEHQINSVS INENNLGIMG ANSSHNVTVS SGGNFEEDFP GFPVNWNSKN 360 ANMQSFCCRT TSMAVEPSTG DVPVKLPSAI VTATSKPQEM KPTSIFTTTY NAQEQMLSSI 420 FMTTPNTTPK QSPSSYFITS SNSQHQNPTS NLLATSNNSL QSHCLENQFF

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MFPCSNSHSP FTYTNQTMLE KCFANDENTS SHLAPLFAED DDQFFSNLFL QQQFFVGTIS  60
SQAQTENSVV ASDNIKEASS NNTVSEQLIP SKRTIPKKKS NGGPKQTSPR KRTGKKDRHS  120
KICTAQGPRD RRMRLSLQIA RKFFDLQDML GFDKASKTIE WLFSKSKTAI KELTERTMSQ  180
VKQFSCSDAA KSTVSFTSES EVVSENLEIV DDGEFVNRLA RVKKNRKIHR VARDSRDKAR  240
ERARERTREK MIIRDLEKSK QSSEASPSNL GQVWSSTPLE TGEKACFCSQ EMKSSLRMMP  300
EVEEPSINNH LLEHQINSVS INENNLGIMG ANSSHNVTVS SGGNFEEDFP GFPVNWNSKN  360
ANMQSFCCRT TSMAVEPSTG DVPVKLPSAI VTATSKPQEM KPTSIFTTTY NAQEQMLSSI  420
FMTTPNTTPK QSPSSYFITS SNSQHQNPTS NLLATSNNSL QSHCLENQFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68800.1	3e-35	TCP family protein