PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024958724.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 272aa    MW: 29945.7 Da    PI: 8.8469
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024958724.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.53.4e-18180230255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +++GVr+++ +g+++AeI+ p++    +r++lg+f t+eeAa a+++a+ k++g
  XP_024958724.1 180 RFRGVRRRP-WGKFAAEIKNPCKK--GARIWLGTFSTPEEAALAYDQAAFKIRG 230
                     69*******.**********9653..3*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MSETLSDSDT AMLELVRKYL LEEPDILCPF PAINTPSDEP YYSRSSSFTS PFSSEKSIEP  60
SFCVDSYVDS LSSVISSCKS GVSSPSNSII NPFFHDNSLA SSCSESTHSP SPSYTRSNSS  120
LTVGSDISTG FQVTNWEGGP ALHSPTSPVS TEKAQFKVDF SLGKVEKIKK NDQRSKDWRR  180
FRGVRRRPWG KFAAEIKNPC KKGARIWLGT FSTPEEAALA YDQAAFKIRG SRAMVNFPHL  240
IGSKTLNPLC PLSQVALECK LKSKGFKTKP EQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.18e-27ERF family protein