PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024958786.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 164aa    MW: 18191.4 Da    PI: 9.9967
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024958786.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.54.5e-204898255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +++GVr+++ +g+++AeIrdp ++g  +r++lg++g++e+Aa a+++a+ k++g
  XP_024958786.1 48 KFRGVRRRP-WGKFAAEIRDPAKRG--ARVWLGTYGSPEDAALAYDQAAYKMRG 98
                    89*******.**********97765..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MSDSDLSFLD SIHDHLLQDS KISEGTTEKV KKELVVVDGT HAPSGWRKFR GVRRRPWGKF  60
AAEIRDPAKR GARVWLGTYG SPEDAALAYD QAAYKMRGSR AMLNFPHLIG TNMAEPVRVA  120
PRRRTTEVVV SAPSFPSEED GGLKRSRTSS SDATTVDESI SRPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.15e-43ERF family protein