PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024958906.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 351aa    MW: 37463.9 Da    PI: 8.1971
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024958906.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.51.4e-1759108255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+WvAeIr+p++   r+r +lg+f tae+Aa+a+++a+  l+g
  XP_024958906.1  59 KYRGVRQRS-WGKWVAEIREPRK---RTRRWLGTFATAEDAARAYDRAAVILYG 108
                     7*****999.**********954...5999******************977765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MDTSNDPHLP ASPPPPPPPT VITATHGGNG SGSGSGSPQR NNNNRKSKGK GGPDNSKFKY  60
RGVRQRSWGK WVAEIREPRK RTRRWLGTFA TAEDAARAYD RAAVILYGSR AQLNLQQPSG  120
DGNNTTATAT GSSSSHPSSS SSSPRGGAGS GSSSSSSTTQ TLRPILPRPA AFNLTFSPPS  180
QASPSGVPVL ANYMPYPFYP TVHQGTTSGG SIVQYALQLV QPNHQYLPYS NMNKFSEDPT  240
FRMTTTPTSY DPNANTNPSN NNCQWEQQPL QECQNHQPNV KEDINSLVGS VGSSLSLVSN  300
SSPTMVVGDS VSDPIMAVGG EPSSPSLWSL TNDDEYPPPS IWDYGDPSFD F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40220.16e-26ERF family protein