PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024958963.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 151aa    MW: 16845.6 Da    PI: 4.2145
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024958963.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP222.33.2e-077342956
             AP2 29 krfslgkfgtaeeAakaaiaarkklege 56
                    ++ +lg+++t eeAa  +++ + kl+g+
  XP_024958963.1  7 QQLWLGTYDTSEEAAMVYDNVAIKLHGA 34
                    789***********************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    
MDSATRQQLW LGTYDTSEEA AMVYDNVAIK LHGAAAITNF VFPTVLENPP PTNVTSMSDH  60
HPNRKSLKLP LADAPSLDYQ SFGSIQIDDE VASFNMHHDF RSINSKQFDD FGIAPIAFDF  120
ISETGCGSSS TLKIDNYFED ISDRTLDLWF S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.12e-12ERF family protein