PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024959033.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family C2H2
Protein Properties Length: 150aa    MW: 17063 Da    PI: 7.6691
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024959033.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.40.000484062123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C++C + F ++  +  H++ H
  XP_024959033.1 40 FSCSYCRRKFYSPQAFGGHQNAH 62
                    89**************9999988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
MSFLNLHQPE NELDIEIFRD PNLPSSSLLS SLHNNDQRVF SCSYCRRKFY SPQAFGGHQN  60
AHKLERTLAK KSREMSLSAA RYHSEWNQMP SRFGSNGSSH VEPVQPPTVV GIEGLQLFGS  120
GETRREMGYG YKGDQRVDDG FNQLDLSLRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57520.18e-19C2H2 family protein