PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024959067.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 228aa    MW: 24927.5 Da    PI: 4.7273
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024959067.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.62.7e-173584255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     y+GVr +  +g+Wv+eIr+p++   + r++lg+f  +e+Aa+a++ a+++++g
  XP_024959067.1 35 IYRGVRMRA-WGKWVSEIREPKK---KSRIWLGTFSDPEMAARAHDVAALSIKG 84
                    69****998.**********854...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MADLPDSNLF ANEPNPKMGK RSREADSKNN SKHPIYRGVR MRAWGKWVSE IREPKKKSRI  60
WLGTFSDPEM AARAHDVAAL SIKGKSAILN FPDLAGILPR PESCSPRDVQ AAATKAAAMN  120
HLNPTPSTPS TSSSSSYSAV STLTSEEVST GSPPAEELDE IVELPSLGES YDSAESRNDY  180
VFVDSGWDYY SSSTPWPENY DGGYFAGEPL SILSSDTFFP DALSWQHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.14e-57ERF family protein