PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024960447.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 196aa    MW: 22112.4 Da    PI: 5.2051
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024960447.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.71.5e-181767256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+GVr +k +g+Wv+eIr p++   r r++lg+++++e+Aa+a +aa  +l+g+
  XP_024960447.1 17 KYRGVRKRK-WGKWVSEIRLPNS---RERIWLGSYDSPEKAARAFDAALFCLRGN 67
                    8*****999.**********933...5*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MVKSPPPTTL ERVDEAKYRG VRKRKWGKWV SEIRLPNSRE RIWLGSYDSP EKAARAFDAA  60
LFCLRGNTAN FNFPHQPPNI PGATDLHPSQ IQAVAATYAN ESSNSPSPDV VINNHNYHLQ  120
TPAAASTSNN VNVDEQDSFL MDHVHTNDAV PDFGIFPGFD DYFMPMHPPL LTAHDYYGSE  180
EQVFDSQDSS FQLWNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.14e-56ERF family protein