PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024960898.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 253aa    MW: 28246.6 Da    PI: 5.8071
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024960898.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2591.2e-1861111256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     +y+GVr+++ +gr++AeIrdp +   + r +lg+f+taeeAa a++ a+++++g+
  XP_024960898.1  61 KYRGVRRRP-WGRYAAEIRDPQT---KERRWLGTFDTAEEAAVAYDSAARAMRGN 111
                     7********.**********943...4999**********************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MEDALSKLSG FIGSPSEMDH RLLPNIATGT ATFQKRCNTN TTPTAPAAKR ATVKDNNGGM  60
KYRGVRRRPW GRYAAEIRDP QTKERRWLGT FDTAEEAAVA YDSAARAMRG NKARTNFFYP  120
PPLPEFLIPA ATTTTTTMAI NHDDYKDFFP TEPDDSGLLD EVLTGFYPKP NKKSGSEPFS  180
PLMTTNSVPK TVESNNPIEG FLIKNQQFEM DQRLNGVGWM GFYGDQMEAF GIQESIFDDT  240
FANHSETVSF LRA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.12e-25ERF family protein