PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024961164.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family C2H2
Protein Properties Length: 215aa    MW: 23763.9 Da    PI: 8.3474
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024961164.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.0002680102123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C + F ++  L  H++ H
  XP_024961164.1  80 FSCKYCRRKFYSSQALGGHQNAH 102
                     89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MEPTNDTFLV EDGSEIRNQA ATSQSKDCAT TNHIHLESTR PLKSNLLDLT LGFNAMIPEP  60
VGLESGSPTT VLGPAIPRVF SCKYCRRKFY SSQALGGHQN AHKREKMLVK RAMRVGLLSN  120
RYASLASLPL HGSTFRSLGI KAHGSLHQHV VAREIPNFDA VRGGTRFDQR YCGLPMFVED  180
DEAEMFWPGS FRQIDGVSAD SNRDSSTTPD LTLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.19e-45C2H2 family protein