PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024961236.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 207aa    MW: 23044.8 Da    PI: 6.2226
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024961236.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.53.3e-181666155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ykGVr ++ +g+Wv+eIr p   ++++r++lg++ t+e Aa+a++aa ++l+g
  XP_024961236.1 16 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSHSTPEAAARAYDAALLCLKG 66
                    59*****998.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MKKKDQNTHH ETLSKKKYKG VRMRSWGSWV SEIRAPNQKT RIWLGSHSTP EAAARAYDAA  60
LLCLKGPSAN LNFPPHHYNH LHYSTTAMSP KSIQKVAATA AATTEPVTNA TTTTASPPLP  120
MHSPSNSSFL SSPTSSSLHL PTSPFDDEIL LANDSFDTTI YEPWSWCNLD APIFNDLMFG  180
EPIFDPSCSW MVEDVDEDGD IPLWSFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.17e-31ERF family protein