PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024961611.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family G2-like
Protein Properties Length: 279aa    MW: 30913.7 Da    PI: 7.2752
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024961611.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like108.24.4e-341973155
         G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                    k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl
  XP_024961611.1 19 KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 73
                    79****************************************************8 PP
2Myb_DNA-binding63.83.3e-202172148
                     TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                     r+rWT e++e++vdav+qlGg+   t+k + r mg +g+t +++ks++qky+
   XP_024961611.1 21 RLRWTHELHERFVDAVAQLGGPdraTPKGVLRVMGvQGLTIYHVKSHLQKYR 72
                     89*************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MDLVNGANGI NNSPSLASKQ RLRWTHELHE RFVDAVAQLG GPDRATPKGV LRVMGVQGLT  60
IYHVKSHLQK YRLAKYLPDS SSEGKTFNQK ESSDMISSLD GSSGMQITEA LKLQMEVQKR  120
LHEQLEVQRQ LQLRIEAQGK YLKKIIEEQQ RLGGVLSEVP GPESDNKTDS AAPGPTFESP  180
LLDKPEKERA SGKSISVDES FSSRHEPLTP DSGCHLGSPI ESPRGERSMK KRRVSMDTTC  240
SKPALSLTHQ ILESSFRPPY QQQSEQFGSS SGMSIDNED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.11e-95G2-like family protein