PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024961648.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 175aa    MW: 19909.4 Da    PI: 6.1383
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024961648.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.76.1e-182272155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + y+GVr++  +g+Wv+e+r+p++   ++r++lg++ tae+Aa+a++ a ++++g
  XP_024961648.1 22 PVYRGVRRRD-SGKWVCEVREPNT---KTRVWLGTHPTAEMAARAHDVAVLAMRG 72
                    68*****999.7******999833...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MLAENNPKKR AGRKKFKETR HPVYRGVRRR DSGKWVCEVR EPNTKTRVWL GTHPTAEMAA  60
RAHDVAVLAM RGRSACLNFA DSLSRLPVPE SNHIKDIQKA AAEAAEAFRP RQDVGEIEEW  120
KYSPESSFYI DEEDVFEMPE FFASMAEGLM VSPPKTDNFT DDVECGDNGS LWSFQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.11e-63ERF family protein