PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024961650.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 190aa    MW: 21764.9 Da    PI: 7.6294
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024961650.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.82.4e-173383155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + y+GVr++  +g+Wv+e+r+p++   + r++lg++ tae+Aa+a++ a ++++g
  XP_024961650.1 33 PVYRGVRRRN-TGKWVCEVREPNT---KLRVWLGTHPTAEMAARAHDVAILAMRG 83
                    68*****887.9******999833...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MKNAFLAVGE VMLAAENPKK KAGRKKFKET RHPVYRGVRR RNTGKWVCEV REPNTKLRVW  60
LGTHPTAEMA ARAHDVAILA MRGRSACLNF ADSIWRLPVP ESKQIKDIQK AAAEAAEAFR  120
PRLDQVMEID DEREEWPEIS FYSDEEMFER PGYLDSMGPL LMVLPPQTSG DDVDFMGNIT  180
IQFHHSFFSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.12e-58ERF family protein