PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024961849.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 204aa    MW: 22623.5 Da    PI: 9.7038
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024961849.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.95.9e-1970120255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      ++GVr+++ +g+++AeIrd + ng   r++lg+f++ae Aa a+++a+++++g
  XP_024961849.1  70 PFRGVRRRP-WGKFAAEIRDSTRNG--VRVWLGTFDSAEAAALAYDQAALSMRG 120
                     69*******.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MSSSLPNHSP ESSIGSSPEF SPWDTNSLPF NENDSEEMLL FGLLTTGFDT TTSSDEVTSR  60
SLKTPTKITP FRGVRRRPWG KFAAEIRDST RNGVRVWLGT FDSAEAAALA YDQAALSMRG  120
SSAILNFPAA KVRESLREMM DVKRVADGGG SPVMALKKRH SMRRRDANKK SRRNRGEEKV  180
VFEDLGVDFL EQLLTSSIEN KSCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.13e-50ERF family protein