PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024962050.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family C2H2
Protein Properties Length: 249aa    MW: 27479.9 Da    PI: 9.1678
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024962050.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.50.00016688123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C++ F++   L  H+++H
  XP_024962050.1 66 YTCTFCKREFRSAQALGGHMNVH 88
                    9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MEKSSVMNHS NSLKDQKNGG RSATNGIIKD SKAATDPYSW GNITDQDSLG DGGDLLGGFS  60
WPPRSYTCTF CKREFRSAQA LGGHMNVHRR DRARLRQMPS SRDLPLHPQS FSSNYSLLNL  120
NQDPNPNPNP NLTFSPYISS NLSCNPTMFP SFSSKSMLSP LISPSPSSLQ PNLPCLSPSY  180
RLRPIGSANL TMMKSQIPSF GVHKYDGFLN ENDNKIVKKS EIIRLNLEIG LLGESKSDDL  240
DLELRLGVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23130.12e-23C2H2 family protein