PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024962228.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 290aa    MW: 31088.7 Da    PI: 7.9099
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024962228.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.14.4e-182475156
             AP2  1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                    +++ GVr+++ +grWvAeI+d      ++ r +lg+f+ta++Aa+a++ a+++l+g+
  XP_024962228.1 24 PRFVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTADDAARAYDDAARSLRGA 75
                    6799******.7*********....4456*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MSIPVADGGV KGRRKKASNS RGHPRFVGVR QRPSGRWVAE IKDSLQKVRL WLGTFDTADD  60
AARAYDDAAR SLRGANARTN FEPPDAVRCS PENSEPFCFE EACRSEDAEN GLVGALRAKL  120
FLGSSSKHAA AKGKSLGFPA SQHHPVGVKR KTPSTAVPPS VITNLPLVNH DLIRVASPIN  180
LDEGQWRNTC YEPQPWSATT ASSSAAKNQV IDVLSSLLDT SLMDSLWPLT NEAIEATVVK  240
TATGIWQEQQ VLHCDNSWGG SGSGGGDQAL NGAPNASSWD PFIYLNSVLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-17ERF family protein