PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024962282.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 270aa    MW: 28385 Da    PI: 6.4219
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024962282.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.85.4e-1888136355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GVr ++ +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a+ +++g
  XP_024962282.1  88 YRGVRKRS-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDVAAIAIKG 136
                     9****888.**********843...6**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MENATQVNQT STSTTTTITA ATVSSSASST SASSWPSASK GCKSQKGSKR APKGNNGNEE  60
KKAGKNGGGG GGGGGGSGGE EGEEHLTYRG VRKRSWGKWV SEIREPRKKS RIWLGTFPTA  120
EMAARAHDVA AIAIKGASAY LNFPQSAHLL PQPATRSPKD IQEAAAKAAV MTYGRDGEGA  180
EPDSQPMLSH SHSHSSTTLS SDHTQEGAEP AESQETMASD DDTFFDLPDL SLHHTGQNNG  240
FCIASSWQLV AGVDTGCRLG AEEPFLWEIY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.14e-42ERF family protein