PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024962283.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 202aa    MW: 22062.6 Da    PI: 7.865
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024962283.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.42.1e-1988138255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +++GVr+++ +g+++AeIrdp ++g  +r++lg++ t+e+Aa a+++a+ k++g
  XP_024962283.1  88 KFRGVRRRP-WGKYAAEIRDPAKRG--ARVWLGTYETPEDAALAYDQAAYKIRG 138
                     89*******.**********97765..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MFQQSFMSES DLSFLDSIQH HLLYDSQISD LFPATGSGPS SSGAATLGSV VVSGGGSVVK  60
HEIITEEVEN QELVVGARGN HAPQEFRKFR GVRRRPWGKY AAEIRDPAKR GARVWLGTYE  120
TPEDAALAYD QAAYKIRGSR ALLNFPHLIG TDMAEPVRVT PRRKSVMEAG SPPSSSSEDG  180
AIRIPRKSSS DGTTVDGYYR PY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.12e-44ERF family protein