PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024962592.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 199aa    MW: 22440.9 Da    PI: 4.9109
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024962592.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.75.9e-184696155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + y+GVr++  +g+Wv+e+r+p++   ++r++lg++ tae+Aa+a++ a ++++g
  XP_024962592.1 46 PVYRGVRRRN-SGKWVCEVREPNT---KTRVWLGTHPTAEMAARAHDVAVLAMRG 96
                    68*****888.8******999833...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MNSLEDPASP SDCRSSNGYG DEEVMLAENN PKKRAGRKKF KETRHPVYRG VRRRNSGKWV  60
CEVREPNTKT RVWLGTHPTA EMAARAHDVA VLAMRGRSAC LNFADSLSRL PVPESNHIKD  120
IQKAAAEAAE AFRPRQDVGE IEEWKYSSES SFYIDEEDVF EMPEFFASMA EGLMVSPPKT  180
DNFTDDVECG DDGSLWSFQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.13e-65ERF family protein