PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024962663.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 168aa    MW: 18550.8 Da    PI: 8.9092
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024962663.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.92.2e-173584255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     ykG+r +k +g+WvAeIr+p   +kr r++lg++ t+  Aa+a++ a   l+g
  XP_024962663.1 35 PYKGIRMRK-WGKWVAEIREP---NKRSRIWLGSYSTPIAAARAYDTAVYHLRG 84
                    59*****99.**********9...336**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MEEIGGRGGG GGELDGRCNS SSCPSTAKRK NDQRPYKGIR MRKWGKWVAE IREPNKRSRI  60
WLGSYSTPIA AARAYDTAVY HLRGPSARLN FPELLASDGG PHELSAASIR KKATEVGARV  120
DAETSCTLMS RSGTPSELKP CWFQEKPDLN KIPKPEPESE YPDGDDNW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1512GGRGGGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23340.19e-54ERF family protein