PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024962693.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 410aa MW: 45120.9 Da PI: 6.3292

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024962693.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	29.6	1.5e-09	221	279	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i+eLe+kv++L++e ++L +l ++ + l++e+ XP_024962693.1 221 KRAKRIWANRQSAARSKERKMRYIAELERKVQSLQTEATSLSAQLTLMQRDTSGLTAEN 279 9*****************************************99988877777666665 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence
MEKDKSPNVG GGLLPPSGRH SVFSPSGNNL SPKPEPSVST TLPPVGPGTG ETGRFGGHEM 60 PLESSHFSHD ISRMPDNPPK HLGHRRAHSE ILTLPDDISF DSDLGVVGGF NGPSFSDETE 120 EDLFSMYLDM DKLNSSSGFQ EGDSSSSAVQ PSEAATPQPE NLVPSSSERP RVRHQHSQSM 180 DGSSTIKPEM LTSGPEETSS ADAKKSMSAA KLAELALVDP KRAKRIWANR QSAARSKERK 240 MRYIAELERK VQSLQTEATS LSAQLTLMQR DTSGLTAENS ELKLRLQTIE QQVNLQDALN 300 EALKEEIQHL KVATGQNLTN GGALMNFPPS FGGGNQQQQF YPNSQAMNTL LTAQQFQQLQ 360 IQSQKQQHQF QQQQLRQFQQ HQLQQQGSSS DLKIRSLKEH GSEFNPPRFE

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence

MEKDKSPNVG GGLLPPSGRH SVFSPSGNNL SPKPEPSVST TLPPVGPGTG ETGRFGGHEM  60
PLESSHFSHD ISRMPDNPPK HLGHRRAHSE ILTLPDDISF DSDLGVVGGF NGPSFSDETE  120
EDLFSMYLDM DKLNSSSGFQ EGDSSSSAVQ PSEAATPQPE NLVPSSSERP RVRHQHSQSM  180
DGSSTIKPEM LTSGPEETSS ADAKKSMSAA KLAELALVDP KRAKRIWANR QSAARSKERK  240
MRYIAELERK VQSLQTEATS LSAQLTLMQR DTSGLTAENS ELKLRLQTIE QQVNLQDALN  300
EALKEEIQHL KVATGQNLTN GGALMNFPPS FGGGNQQQQF YPNSQAMNTL LTAQQFQQLQ  360
IQSQKQQHQF QQQQLRQFQQ HQLQQQGSSS DLKIRSLKEH GSEFNPPRFE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06070.1	1e-131	bZIP family protein