PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024963061.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 260aa    MW: 29539.3 Da    PI: 7.504
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024963061.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.99.4e-1789139255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     ++ GVr ++ +g+++AeIrd + ng   r++lg+f++aeeAa  +++a+ +++g
  XP_024963061.1  89 RFIGVRKRP-WGKFAAEIRDSTRNG--IRVWLGTFDSAEEAALVYDQAAFAMRG 139
                     689******.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MKLPSPMSSY FNLEFFPKSP CSWDELLFSH HMLSEVHIKE EENLVFKDPN EFQYEHSSET  60
DPNKTSQPEK GTLEAIAKPK EEPEVHKKRF IGVRKRPWGK FAAEIRDSTR NGIRVWLGTF  120
DSAEEAALVY DQAAFAMRGS STQLNFPMER VKESLKGKGY SSFKDGSSPA AAIKETHRVR  180
RNSKSKRNSR NQVCSEIPMV IEDLGSDLLE KLLFTRISKS KRNNKNQVCC ETPVVFEDLG  240
SDLLEQLLFT SESSSSSTCS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.19e-42ERF family protein