PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024963095.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family WRKY
Protein Properties Length: 281aa    MW: 30686.7 Da    PI: 10.6213
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024963095.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY802.5e-25205263259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      D y+W+KYG K+v gs fpr YY+C sa gCp++k+ve s +d k++ +tY geH+h+
  XP_024963095.1 205 ADDYSWKKYGEKKVDGSLFPRVYYKCNSAkGCPARKRVELSVTDSKMLLVTYDGEHHHH 263
                     69************************9988***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MAVDLVGIQT IEHLNRIFQL KNHDFAVSSN FKQAVSALKR SGHARFRRGP PPSSSDQHAP  60
SISSQSEEKR PKNPPPGEST TVSKDCSLKR SVTDTISSFQ LTTSSLVSSL AGEGLEGSVS  120
NGKQLSSLGI VAPAPSFSSR KPPLPSSHRK RHSTDRPSAT LQGSGKEDHS ASRTPCHCCK  180
RRKTVSKQKT RRIPIIGSKI ESIPADDYSW KKYGEKKVDG SLFPRVYYKC NSAKGCPARK  240
RVELSVTDSK MLLVTYDGEH HHHHTPTPLP ASLTALTIQS K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.11e-44WRKY family protein