PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024963225.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family WRKY
Protein Properties Length: 185aa    MW: 20370.1 Da    PI: 10.5783
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024963225.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY78.95.7e-25107165259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      D y+W+KYG K++ gs++pr YY+C +  gCp++k ve + +d k++ +tY geH+h+
  XP_024963225.1 107 XDDYSWKKYGEKKIDGSPYPRVYYKCNTGkGCPARKGVELALNDSKMLLVTYDGEHQHR 165
                     599***********************8776****************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MCAKVGVDRP TSNKGFWAEL LGIGEQFSSL GIVAPAPTFS SRKPPLPSTH RKRCSADRPT  60
ASLHGSGREN HSVSRSGCRC CKRRKIGSKR EIRRVPIIGS KVTSIPXDDY SWKKYGEKKI  120
DGSPYPRVYY KCNTGKGCPA RKGVELALND SKMLLVTYDG EHQHRHHHAP TPVPTSLTGL  180
AVQSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24570.15e-32WRKY family protein