PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024963236.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family Dof
Protein Properties Length: 273aa    MW: 30410.5 Da    PI: 5.5625
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024963236.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof115.22.7e-361469762
          zf-Dof  7 kcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                    +cprC s+ntkfCyynnysl+qPryfCk+CrryWtkGG+lrn+PvGgg+rk ++++
  XP_024963236.1 14 PCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNIPVGGGCRKTRRAR 69
                    7**************************************************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MERGWKPNVE ICPPCPRCGS SNTKFCYYNN YSLTQPRYFC KGCRRYWTKG GSLRNIPVGG  60
GCRKTRRARS VRISDTVSSQ NFLAHGGVGT NGYGGRGNIE TRSSCDGGSS MVQQPSNIDL  120
QQVYANFLNQ RPQGTDDHEQ MHDHVFHSEV DPMLTFGFPT IPNMEMEFGA TNYGSNLESF  180
LGEGNGMQFC GYNSIFNNHE EEQEKHDYFG TSGVSNCGLP PLPGEELGWS ESNIGFSDNV  240
VNHRIDEPEG HISGEGSVKM FDLPENTETI FRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52440.12e-44Dof family protein