PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024963815.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 195aa    MW: 21539.1 Da    PI: 7.4575
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024963815.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.29.8e-19656155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                    ++++GVr++  +g+Wv+eIr+p        +r++lg+f+tae Aa+a+++a+  ++g
  XP_024963815.1  6 KKFRGVRQRQ-WGSWVSEIRHP-----LlkRRIWLGTFDTAETAARAYDQAAILMNG 56
                    59*****999.**********8.....334**********************98876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MEVQSKKFRG VRQRQWGSWV SEIRHPLLKR RIWLGTFDTA ETAARAYDQA AILMNGQNAK  60
TNFPVGNKSL PGSHNSPAEI PADTLTAKLR KCCKDPAPSL TCLRLDSDNS HIGVWQKHAG  120
KRSGSGWVMR VELGGKRKER ASEEEETTSL SRSSESLSPT VTDDGCPTGG GGGDESIEEE  180
NRVAMQMIEE LLDWN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25390.29e-69ERF family protein