PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024964182.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family FAR1
Protein Properties Length: 220aa    MW: 25119.4 Da    PI: 8.1301
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024964182.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR184.91.3e-2658147190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     kfY+eYA+++GF++r+++ ++s+ +++i++r++ C+keg+ ++ k++  + r++++++r gC+a++ v+ +k gkw+vt++e+eH+H+l+
  XP_024964182.1  58 KFYDEYARHLGFKMRIDQCRRSEVDKKIISRRLSCNKEGYYTKAKNQFGQIRKQHTSSRQGCNAMMLVRVNKFGKWVVTRFEKEHTHPLV 147
                     6***************************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MIGTRIGDSS QDTAELVDVN LAAGSVGDGV GSDVGCEQRA VAEPRVGMEF DSEDAAKKFY  60
DEYARHLGFK MRIDQCRRSE VDKKIISRRL SCNKEGYYTK AKNQFGQIRK QHTSSRQGCN  120
AMMLVRVNKF GKWVVTRFEK EHTHPLVLSA CLSINEGDCK ERRIEALTTE LKHQDQLINF  180
YREHLSTFLK DLEQQTEVLS TKIQVAVNNV REIETKDQKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.11e-56FAR1 family protein