PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024964373.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 201aa    MW: 22797.2 Da    PI: 5.7059
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024964373.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.27.2e-174696155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + y+GVr++  +g+Wv+e+r+p++   + r++lg++ tae+Aa+a++ a ++++g
  XP_024964373.1 46 PVYRGVRRRN-TGKWVCEVREPNT---KFRVWLGTHPTAEMAARAHDVAVLAMRG 96
                    68*****887.9******999833...48************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MEDTHSDSKS STAGGDCYVE QEQVMLAEHN PKKRAGRKKF KETRHPVYRG VRRRNTGKWV  60
CEVREPNTKF RVWLGTHPTA EMAARAHDVA VLAMRGRSAC LNFADSVWRL PIPESRNIKD  120
IQKAAAEAAE AFRPREDAAE MEERKELPEI SLYNDEEMMF GLPEFFASMA EGLMVTPPNT  180
LGYGNSMDDX DCGIDXSLWS F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.11e-62ERF family protein