PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024964375.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 207aa    MW: 23033.1 Da    PI: 7.2932
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024964375.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.61.4e-1755105155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr++  + +Wv+e+r+p   +k+ r++lg++ tae+Aa+a++ a ++l+g
  XP_024964375.1  55 PVYRGVRRRN-SSKWVCEVREP---NKKSRVWLGTYPTAEMAARAHDVAVLALRG 105
                     68*****888.8******9998...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MNTFNPLMFP SPSPENASTS DCSSGAGFSE SDVMLASGNP KKRAGRKKFK ETRHPVYRGV  60
RRRNSSKWVC EVREPNKKSR VWLGTYPTAE MAARAHDVAV LALRGRSACL NFADSVWRLP  120
VPESSNVKDI KKAASKAAEA FRQTVEIEEE TKELSEIVVY VDEEEMFPGF LASMAEGLMV  180
PPPQTLGYAG NYVDNVEFCV DVSLWNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.11e-68ERF family protein