PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024964376.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 194aa    MW: 21672.4 Da    PI: 4.7528
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024964376.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.53.9e-194898155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    + y+GVr+++ +g+Wv+e+r+p++   + r++lg+f tae+Aa+a++ a+++l+g
  XP_024964376.1 48 PVYRGVRQRS-SGKWVCEVREPYK---QSRIWLGTFPTAEMAARAHDVAALALRG 98
                    68*****999.7*********865...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MEMNNYYDQF VDGSSSMEGG ESSEEVMLAS SHPKKRAGRK KFQETRHPVY RGVRQRSSGK  60
WVCEVREPYK QSRIWLGTFP TAEMAARAHD VAALALRGKS ACLNFADSSW RLPTPASMDP  120
NDIRKAAVQG AEEFRPVDEE STRVVYMDEE EEFGMPGLLV NMAEGLMLPP PPPPLPYGGG  180
EEAEYGGEMS LWSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12610.14e-49ERF family protein