PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024964509.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family WRKY
Protein Properties Length: 145aa    MW: 16260.3 Da    PI: 6.2929
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024964509.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY42.11.7e-13881262358
                     EEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
            WRKY  23 sYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                     +YYrCt++   +Cp+kk+v+r ++dp ++e tY+geH++
  XP_024964509.1  88 GYYRCTHQklyNCPAKKHVQRLNNDPYTFEGTYQGEHTC 126
                     6*******999**************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
MEEIVSLIFH GGKLVKELEE SLPNIANQPH VLISSCDEIS RVFGNAREQL TLAVQDYGTH  60
HESLPQMEVG GGSVPEWLRS SHATDMGGYY RCTHQKLYNC PAKKHVQRLN NDPYTFEGTY  120
QGEHTCIMSS TAPSMPPPSL LYQKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.25e-32WRKY family protein