PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024964692.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family bHLH
Protein Properties Length: 197aa    MW: 21985.4 Da    PI: 8.8331
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024964692.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.23.9e-052269152
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHH CS
             HLH  1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIk 52
                    +r  + erE+  R+++N+ f +L e l         +   Ka+iL +++++Ik
  XP_024964692.1 22 KRIHKAEREKMKREHLNELFLKLAEALEVgE-----QNSGKASILGETTRFIK 69
                    688899*********************9944.....56678889999999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MGAKNSPTSL LPSKKNLGKV PKRIHKAERE KMKREHLNEL FLKLAEALEV GEQNSGKASI  60
LGETTRFIKV MLDQIKSLKK ENAALLSESQ YVKLEKNEIE DETCGLQIQI GELKRRLTVK  120
EEKKLDLNAP PIESQEQQCL MEDSPIVNPV FVFPACLNFQ GGGGDGDGGV VKAASNVRKP  180
HPRYPTSLDS WHFQLLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.23e-41bHLH family protein