PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024964713.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family MYB_related
Protein Properties Length: 82aa    MW: 9007.99 Da    PI: 9.0343
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024964713.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.39.6e-101258246
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                     g+WT+   + + +a + + ++   +W+ +ar +g g+t++++k ++  
   XP_024964713.1 12 GSWTAKQNKAFEKALAVFDKDtpdRWHNVARAVG-GKTAEEVKQHYEV 58
                     89********************************.**********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 82 aa     Download sequence    
MASSSMSSRG SGSWTAKQNK AFEKALAVFD KDTPDRWHNV ARAVGGKTAE EVKQHYEVLV  60
EDVKHIENGQ VPFPNYRTTG GA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.12e-38MYB_related family protein