PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024965027.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 137aa    MW: 15136 Da    PI: 8.0332
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024965027.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2507.6e-161767256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                    +ykG+r + ++g+Wv+eIr+p   g +  r +lg++ t+e+Aa a + a  +l+g+
  XP_024965027.1 17 RYKGIRCR-RWGKWVSEIRVP---G-TqDRLWLGTYTTPEGAAMAQDVASYCLRGA 67
                    8****955.5**********8...3.35*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    
MSTSSDEGCS TNQEQKRYKG IRCRRWGKWV SEIRVPGTQD RLWLGTYTTP EGAAMAQDVA  60
SYCLRGAVSL HKLNFPNMLP PTARIDLSPR SVQKAASDAG MAMDARLIAS RETTTVNYDD  120
RSAKEGEGLS ISVDDYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22810.12e-47ERF family protein