PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024965076.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

Protein Properties

Length: 231aa MW: 26293.1 Da PI: 10.1369

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024965076.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	49.3	8.7e-16	139	224	2	83
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFk 83 +k lt+sdv +++r+ lpk+ aee+ ++++e++ ++++d s+++W++++++ +++gr++l + +Fvk n+L++gD + ++ XP_024965076.1 139 QKLLTHSDVKEQSRILLPKREAEENlpRLDSKEGIRIVMKDvVSNEEWKMQYRFwANQKGRMYLLDQSGDFVKKNKLEVGDQLKLY 224 799**********************77778999**9999***9855555667788899***********99887 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MENSNGFLSK TSKPCPDFPT QDSQKPYPCT SGMRNSESPV CLNLFPVAVS SIHPIQPLHI 60 PESGESKKLQ AKIARSNRKK AREMTTNKTI NPSISSSLSS PSSSIRSAII KSTKPHKSSD 120 QDHCIFYTPN KVKLSFVLQK LLTHSDVKEQ SRILLPKREA EENLPRLDSK EGIRIVMKDV 180 VSNEEWKMQY RFWANQKGRM YLLDQSGDFV KKNKLEVGDQ LKLYQDELRN L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28300.1	4e-31	B3 family protein