PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024965244.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family SRS
Protein Properties Length: 123aa    MW: 12900.3 Da    PI: 5.4925
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024965244.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF70283.74.4e-26354102153
          DUF702 102 tsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153
                     + ++P+ev+s+avfrcvrvs++d++ee+laYqta +igGhvfkGiLyd+G+e
  XP_024965244.1   3 VGHFPAEVNSPAVFRCVRVSAMDEAEEQLAYQTALNIGGHVFKGILYDHGPE 54 
                     678***********************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    
LEVGHFPAEV NSPAVFRCVR VSAMDEAEEQ LAYQTALNIG GHVFKGILYD HGPEGRYNNP  60
GEGSSSGGGG AQLQQLITSG RTAGATASTS IHPAVNFIDP SSTYPTPFSA FMAGTQFFPP  120
PRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G51060.12e-30SRS family protein