PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024965261.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family WRKY
Protein Properties Length: 127aa    MW: 14125.6 Da    PI: 8.0968
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024965261.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY53.16.5e-171372359
                    EEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY 23 sYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
                    sYYrCtsa+C vkk+vers+edp++v++tYeg+H+h+
  XP_024965261.1  1 SYYRCTSASCGVKKRVERSSEDPSTVVTTYEGTHKHP 37
                    8***********************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    
SYYRCTSASC GVKKRVERSS EDPSTVVTTY EGTHKHPCPM TPRGMLPETA TYGGGGGGPS  60
FLLPHQLHYQ QPPQLPFFHN QTNSLSFNNN NTTTTTTTTT TYSHNYLQEG RSYPSPLLRD  120
HGLLQDM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49520.12e-20WRKY family protein