PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024965735.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 288aa    MW: 32985.8 Da    PI: 5.7082
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024965735.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.54.3e-15121171256
             AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                     +++GV  ++ +g W+AeI+d +     + +r +lg+++t eeAa  +++a+ kl+g+
  XP_024965735.1 121 KFRGVQKRR-WGIWAAEIMDlV-----TrQRLWLGTYDTSEEAAMVYDNAAIKLRGA 171
                     89***8666.**********88.....44**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MEDCFMFTPI KQTEHKSRIT KEVPAMLEKF SDQEEFPFPK VIRISMTDPY ATDSSEDEDD  60
HIFERWRVKK YVNEINIQPS SKARMMPVNA NMTTTRNSPC AADLKQRTIK KKKTPEDNVR  120
KFRGVQKRRW GIWAAEIMDL VTRQRLWLGT YDTSEEAAMV YDNAAIKLRG AGATTNFVLP  180
TAIEKPPPTN ITSMSNHHPK QKSLKLPLAD APPSDYQSFD SIQLDDEVAS FDMHHEFRSI  240
NPKQFDDFGI TPIALGFISE TGCGSPSTLK IBNYFEDISD NTLESWFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.18e-41ERF family protein