PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024966121.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 233aa    MW: 26499.5 Da    PI: 8.8118
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024966121.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.35.8e-1684134256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr++  +g+Wv eIr p++   r r +lg+f+ta eAa a++  + kl+g+
  XP_024966121.1  84 LYRGVRQRQ-WGKWVGEIRLPRS---RSRRWLGTFDTAVEAALAYDLEAFKLRGH 134
                     59****999.**********954...4999***********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MEQVADHGKN KGKQPWTPVQ DSAFFFGTKI RKQESRFSFP FSLDDHNLQS SVNLEIPTPS  60
KKRQMISFTP DNKEMDPRQP PGKLYRGVRQ RQWGKWVGEI RLPRSRSRRW LGTFDTAVEA  120
ALAYDLEAFK LRGHQARLNF PHLLVNDQKQ TITLPSSPSM SNPKSSQPSL FNNSYGSEPG  180
SSKDQVLNGF EPNESLSEYG TEPPWETMED GVSYASQAGT FIWDKFEPDL SSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28140.14e-33ERF family protein