PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024966132.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 241aa    MW: 25210.9 Da    PI: 9.871
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024966132.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.21.3e-202070155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++y+GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa+a++ a+++++g
  XP_024966132.1 20 TRYRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDSAAREFRG 70
                    68********.**********8...557************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MAPRGKPDGN AGGGNGGSET RYRGVRKRPW GRYAAEIRDP GKKSRVWLGT FDTAEEAARA  60
YDSAAREFRG DKAKTNFPTS TELSLPTAAA GGGAGGKKVV TKSPSGESST VESSNSAVPI  120
AAAAAVAAAA APLPPSALDL SLSHFPVGFP MAHSLFLYHS QINNNNNNNN GKHSNRLDMF  180
RLDGSVVRAP RLTIGAAVVN GAQSDSDSSS VVNFSYPSDR PQPEKTFALD LDLNFPPPEV  240
A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.14e-26ERF family protein