PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024966929.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 231aa MW: 26058.2 Da PI: 5.7419

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024966929.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	52.5	1.1e-16	152	206	4	58
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 +++rr++kNRe+A rsR+RK+a++ eLe v +Le+e +L ke++el+ke k XP_024966929.1 152 QQKQRRMIKNRESAARSRERKQAYTVELESLVTQLEEEHARLLKEVDELNKERFK 206 689***********************************************99755 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MASSKVMASS SPANQDLQRH QPYAHTVDHN TNLISMNMDD LLKNIYEDSR QTPEDLPADG 60 GGRTVDEDWK DMVDGSSGDP EMTLEDFLTK ARAVREEDVA KLPPVSEYSG VTDPIASFQA 120 VPQQHMQFGS SGGGRGKRKV MVEDPPVDKA TQQKQRRMIK NRESAARSRE RKQAYTVELE 180 SLVTQLEEEH ARLLKEVDEL NKERFKQLME KVMAVDEKRK PAAAIRRSNS M

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03970.1	1e-33	bZIP family protein