PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024967042.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family G2-like
Protein Properties Length: 310aa    MW: 34018.7 Da    PI: 5.9179
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024967042.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like93.32e-29145197255
         G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     +rl+Wtp+LH+rFve+v++L G ++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  XP_024967042.1 145 TRLVWTPQLHKRFVEVVARL-GVKNAVPKTIMQLMNVEGLTRENVASHLQKYRL 197
                     79******************.9*******************************8 PP
2Myb_DNA-binding48.81.6e-15146196148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+ WT+++++++v++v++lG +   +ktI++ m+ +g+t++++ s++qky+
   XP_024967042.1 146 RLVWTPQLHKRFVEVVARLGVKnaVPKTIMQLMNvEGLTRENVASHLQKYR 196
                      789***********************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MGDEVRISDY DVGGADDDGR VLEWEVGLPN VNDLPSLSQL LISAELAYAF SITPETHRSM  60
NDVDRASRDT LASLRGQSQH LMNKINDLNS FSDDRGEEMV VEGEETLDLT REGSDSRKLR  120
RVDSGGAVGG AGEADDSSTK TSKRTRLVWT PQLHKRFVEV VARLGVKNAV PKTIMQLMNV  180
EGLTRENVAS HLQKYRLYVK RMQGLSDEGS SPSDHLFAST PVPKGLHDSG GGGGNGSGMP  240
YPPQLVPMPY PPPQMVPNPA SGGGRAYHHH GFESHSHPYN YNIMMQPRDW SGNNFGSISA  300
YQHRMTSNDE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46640.21e-73G2-like family protein