PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_024967078.1

Organism

Cynara cardunculus var. scolymus

Taxonomic ID

59895

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus

Family

bZIP

Protein Properties

Length: 427aa MW: 47160.2 Da PI: 10.3053

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_024967078.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	45.3	1.9e-14	349	401	5	57
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +r rr++kNRe+A rsR+RK+a++ eLe +v++L++ N++L k+ ee+ ++ + XP_024967078.1 349 RRRRRMIKNRESAARSRARKQAYTLELEAEVAKLKELNHELLKKQEEIMEMQK 401 689******************************************99999865 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MGSFINFKNF GDTSQPELNG SRQMVSNSPL ARQSSVYSLT FDELQNTLGG GGKDFGSMNM 60 DELLKNIWSV EETQAVASTS NFGMDGSVQR QGSLTLLPRT LSQKTVDEVW RELLKSSSNG 120 GFKDGELILE ANLQPPQREM TLGEMTLEDF LMKARVVTEN NEVQTNGRSG RSQNGAYFGD 180 VSQQNVENGS FIFGFQNPNQ NNGFQQQSAQ NNRPTLNQIT ESKNGLNLQP KPQPQPQPPA 240 QPLFPKQAAL DFSAPLNGKL TSPGSKLTIP GTRVGKSEHP IKTSVVQASG IESGVMNIKS 300 LGGLGTGSPR NLIPKSNLDT TPSPPYYAFG EGGLRGRKSS GTLEKVVERR RRRMIKNRES 360 AARSRARKQA YTLELEAEVA KLKELNHELL KKQEEIMEMQ KNQVVEKIKM PWGSKRLCLR 420 RTLTGPW

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MGSFINFKNF GDTSQPELNG SRQMVSNSPL ARQSSVYSLT FDELQNTLGG GGKDFGSMNM  60
DELLKNIWSV EETQAVASTS NFGMDGSVQR QGSLTLLPRT LSQKTVDEVW RELLKSSSNG  120
GFKDGELILE ANLQPPQREM TLGEMTLEDF LMKARVVTEN NEVQTNGRSG RSQNGAYFGD  180
VSQQNVENGS FIFGFQNPNQ NNGFQQQSAQ NNRPTLNQIT ESKNGLNLQP KPQPQPQPPA  240
QPLFPKQAAL DFSAPLNGKL TSPGSKLTIP GTRVGKSEHP IKTSVVQASG IESGVMNIKS  300
LGGLGTGSPR NLIPKSNLDT TPSPPYYAFG EGGLRGRKSS GTLEKVVERR RRRMIKNRES  360
AARSRARKQA YTLELEAEVA KLKELNHELL KKQEEIMEMQ KNQVVEKIKM PWGSKRLCLR  420
RTLTGPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19290.2	5e-46	bZIP family protein