PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024967101.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family WRKY
Protein Properties Length: 246aa    MW: 27613.3 Da    PI: 8.4598
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024967101.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY919.2e-29126186259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dgy WrKYGqKe+ ++++pr YYrCt++   gC+++k+v+rs++dp+++eitY g+H+++
  XP_024967101.1 126 NDGYMWRKYGQKEILNAKYPREYYRCTYRnthGCCATKQVQRSSDDPSIFEITYLGKHTCP 186
                     7***************************98889**************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MNLNSSGNHH SKSNCPFHKL NNGTEHVKKL QIDLNMPASS NETEELSTQN IPNSDDEALS  60
QYAGMDIRRS EYPQPLSGRP HHDDSDTKDS NHKDASRKKK SSSSSILKWK QQVKVSLEIG  120
LEVPPNDGYM WRKYGQKEIL NAKYPREYYR CTYRNTHGCC ATKQVQRSSD DPSIFEITYL  180
GKHTCPKISK TNHPSSATES AYGLIDFSST PEPAASTTKR TSDSSSATQS GSRNSFELSN  240
WPLNHN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.23e-32WRKY family protein