PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024967103.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family WRKY
Protein Properties Length: 211aa    MW: 23673.9 Da    PI: 7.9822
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024967103.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.46.9e-2991151259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dgy WrKYGqKe+ ++++pr YYrCt++   gC+++k+v+rs++dp+++eitY g+H+++
  XP_024967103.1  91 NDGYMWRKYGQKEILNAKYPREYYRCTYRnthGCCATKQVQRSSDDPSIFEITYLGKHTCP 151
                     7***************************98889**************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MPASSNETEE LSTQNIPNSD DEALSQYAGM DIRRSEYPQP LSGRPHHDDS DTKDSNHKDA  60
SRKKKSSSSS ILKWKQQVKV SLEIGLEVPP NDGYMWRKYG QKEILNAKYP REYYRCTYRN  120
THGCCATKQV QRSSDDPSIF EITYLGKHTC PKISKTNHPS SATESAYGLI DFSSTPEPAA  180
STTKRTSDSS SATQSGSRNS FELSNWPLNH N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.23e-32WRKY family protein