PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024967365.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family WRKY
Protein Properties Length: 277aa    MW: 29887.7 Da    PI: 10.5243
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024967365.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY76.14.2e-24201259259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      D ++W+KYG K++ gs++pr YY+C +  gCp++k+ve + +dpk++ +tY  eH h+
  XP_024967365.1 201 ADDFSWKKYGEKKIDGSPYPRVYYKCNTGkGCPARKRVELAIDDPKMLLVTYDREHIHH 259
                     699***********************8776***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MAVDFVGIQS AEHLNRIFHL NNHDFALSSN FKQAVSALNR TGHARFRRGP SPSPSSSDSH  60
APSTSTQSAP VFIGSTGASN ECSFSKSVTD TTTSSRSTNS SSLISPLIAG EEGSVSNGKQ  120
FPCLGIVAPA PAFSSRKPPL PSSHRKRCRA DRPSVSLQGS GSDNHSVSRS GCHCCKRRKI  180
ASKREIRRVP ITGSKVASIP ADDFSWKKYG EKKIDGSPYP RVYYKCNTGK GCPARKRVEL  240
AIDDPKMLLV TYDREHIHHQ APTPILTGLT GLVVQSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.12e-40WRKY family protein