PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024967657.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family ERF
Protein Properties Length: 218aa    MW: 24249.1 Da    PI: 9.0197
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024967657.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.73e-182978356
             AP2  3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    ++GVr ++ +gr++AeIrd ++    ++r++lg+f +a +Aa+a++aa+++l+g+
  XP_024967657.1 29 FRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFNSAVDAARAYDAAARNLRGH 78
                    8*******.**********883....5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MPKATVNTSP AHPSLLAAHG SELKPDIRFR GVRKRPWGRF AAEIRDPWKK TRVWLGTFNS  60
AVDAARAYDA AARNLRGHKA KTNFPSNMTS YRQHNANDLH PFRQNQYSDY QTVVPQNPTC  120
SSLSSTLESN SGSRPPVKSD FVLPRRRHHP RSPPVFPDDC RSDCDSSSSV VVDGGDGGEI  180
GCSSFTKPFQ SIDLNMPPPL DEFEVGFLVD DHCTTLRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.12e-26ERF family protein