PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_024967906.1
Organism
Cynara cardunculus var. scolymus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus
Family G2-like
Protein Properties Length: 333aa    MW: 37192.9 Da    PI: 5.5026
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_024967906.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like103.31.4e-32208263156
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                     k+r++W++eLH+rFv+a++qLGGs+ AtPk+i+elm+v+gLt+++vkSHLQkYRl+
  XP_024967906.1 208 KQRRCWSTELHRRFVNALQQLGGSHAATPKQIRELMQVDGLTNDEVKSHLQKYRLH 263
                     79****************************************************97 PP
2Myb_DNA-binding46.11.1e-14210261148
                      TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W+te++ ++v+a +qlGg    t+k I + m+  g+t  ++ks++qky+
   XP_024967906.1 210 RRCWSTELHRRFVNALQQLGGShaaTPKQIRELMQvDGLTNDEVKSHLQKYR 261
                      568*****************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MGSLNPSPEL TLDLKPSFIP KTISQFLGGM SRIGSVTEKV LQVDDFVDRL ETETRKIEAF  60
ERELPLCMLL INDAIVALKE VSMVLKKSSN AEPVLEEFIP LKNSCDDDAK VESIIKKDSG  120
DKKNWLSSTQ LWNTNENIIQ IPNATIKKRA EEEDCGKAFF FPEIKNPMRE NGLLTEINGD  180
CRLTQNVQSN IQTSGTAGLP PHQQTSRKQR RCWSTELHRR FVNALQQLGG SHAATPKQIR  240
ELMQVDGLTN DEVKSHLQKY RLHTRRFPSS NTNQSGVVLG GGLWMPPQDQ YVGSSKCSNS  300
QSGSPDGPLP NGGNTMDDEE DEKSENYCWT GNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.18e-55G2-like family protein